1.Counting DNA Nucleotides

最新推荐文章于 2022-11-15 23:43:19 发布

转载最新推荐文章于 2022-11-15 23:43:19 发布 · 216 阅读

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原文链接：http://www.cnblogs.com/ylHe/p/6151416.html

本文介绍了一种计算DNA字符串中A、C、G、T四种核苷酸出现次数的方法，通过遍历字符串并使用字典记录每种核苷酸的数量，最终输出这些数量。该方法适用于长度不超过1000nt的DNA字符串。

Problem

A string is simply an ordered collection of symbols selected from some alphabet and formed into a word; the length of a string is the number of symbols that it contains.

An example of a length 21 DNA string (whose alphabet contains the symbols 'A', 'C', 'G', and 'T') is "ATGCTTCAGAAAGGTCTTACG."

Given: A DNA string s

Return: Four integers (separated by spaces) counting the respective number of times that the symbols 'A', 'C', 'G', and 'T' occur in s

Sample Dataset

AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGC

Sample Output

20 12 17 21

# -*- coding: utf-8 -*-

@author: hyl
"""
### 2. Transcribing DNA into RNA ###
d = {'A':0,'T':0,'G':0,'C':0}
with open('C:\\Users\\hyl\\Desktop\\rosalind_dna.txt') as f:
    for line in f:
        for i in line :
            if i == "A":
                d['A'] +=1
            if i == "T":
                d['T'] +=1
            if i == "G":
                d['G'] +=1
            if i == "C":
                d['C'] +=1
print str( d['A']) + " "+str(d['C']) + " " + str(d['G']) + " " + str(d['T'])

转载于:https://www.cnblogs.com/ylHe/p/6151416.html